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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
14
total RNA-seq
2
Hi-C
2
STARR-seq
2
pCHi-C
1
WGBS
1
whole genome sequencing assay
Assay category
71
DNA binding
Target of assay
60
control
9
transcription factor
2
RNA binding protein
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
1
recombinant protein
Date released
66
November, 2017
4
August, 2021
1
November, 2018
Available data
360
fastq
359
bam
326
bigWig
bed narrowPeak
293
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
tar
Organism
71
Homo sapiens
Biosample type
71
cell line
Organ
71
liver
Project
71
AMP
Genome assembly (visualization)
19
hg19
Lab
67
AMP-T2D consortium
4
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
cell line
HepG2
71
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