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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
21
total RNA-seq
4
WGBS
1
DNase-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
67
DNA binding
22
Transcription
4
DNA methylation
1
DNA accessibility
Target of assay
47
control
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
Date released
34
August, 2017
23
May, 2020
20
May, 2022
13
December, 2017
1
August, 2021
1
February, 2020
1
February, 2021
1
July, 2019
1
March, 2020
Available data
44
bam
44
tagAlign
21
fastq
2
tsv
1
csv
Organism
95
Homo sapiens
Biosample type
93
tissue
cell line
1
in vitro differentiated cells
1
primary cell
Organ
252
pancreas
180
epithelium
147
kidney
125
heart
95
liver
94
connective tissue
89
bone element
65
adipose tissue
60
brain
33
blood vessel
33
vasculature
27
eye
26
limb
23
musculature of body
20
lung
12
nerve
11
artery
11
spleen
8
blood
8
bodily fluid
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
95
AMP
Genome assembly (visualization)
hg19
158
GRCh38
Lab
75
AMP-T2D consortium
20
Karen Mohlke, UNC
files.file_type!
bed narrowPeak
biosample_type!
cell line
assembly!
hg19
BIOSAMPLE
ASSAY
95 results
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ChIP-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
single cell RNA-seq
tissue
liver
62
20
3
1
1
right lobe of liver
3
1
1
1
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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