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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
25
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
610
February, 2021
313
May, 2020
269
August, 2017
246
May, 2021
183
August, 2021
168
July, 2018
162
May, 2022
134
February, 2023
110
October, 2019
101
July, 2019
59
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
November, 2017
27
September, 2018
25
February, 2020
23
February, 2018
23
May, 2019
22
December, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
October, 2017
10
December, 2019
10
November, 2018
8
June, 2019
8
November, 2020
7
August, 2020
7
January, 2018
6
September, 2017
5
March, 2019
4
August, 2018
4
December, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
1
January, 2019
Available data
25
tsv
1
bam
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
12
brain
6
pancreas
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
30
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
25
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
biosample_type!
cell line
BIOSAMPLE
ASSAY
30 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
tissue
islet of Langerhans
4
1
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
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