Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
306
control
132
histone
132
histone modification
70
narrow histone mark
62
broad histone mark
28
transcription factor
5
nucleotide modification
4
RNA binding protein
1
recombinant protein
Date released
45
August, 2017
5
November, 2017
5
October, 2017
5
October, 2019
2
May, 2021
Available data
370
bigWig
bed narrowPeak
341
bam
235
bigBed narrowPeak
133
tagAlign
87
fastq
36
bed broadPeak
16
bigBed broadPeak
8
bed bed3+
Organism
62
Homo sapiens
Biosample type
50
tissue
in vitro differentiated cells
10
primary cell
2
cell line
Organ
20
adipose tissue
20
connective tissue
13
liver
10
pancreas
9
brain
4
blood vessel
4
epithelium
4
musculature of body
4
vasculature
4
vein
Project
62
AMP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bed narrowPeak
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
62 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
12
brain
5
islet of Langerhans
5
skeletal muscle tissue
4
+ See 2 more…
primary cell
endothelial cell of umbilical vein
4
pancreatic endocrine cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
cell line
HepG2
1
Panc1
1
See all biosamples
Download