Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
138
Transcription
88
DNA binding
21
DNA accessibility
4
3D chromatin structure
Target of assay
37
control
34
histone
34
histone modification
19
broad histone mark
17
transcription factor
15
narrow histone mark
5
RNA binding protein
Date released
38
May, 2021
25
August, 2017
9
December, 2017
8
August, 2021
8
February, 2018
Available data
146
bam
120
fastq
115
bigWig
bed narrowPeak
40
tagAlign
19
bed bed3+
14
bigBed narrowPeak
Organism
88
Homo sapiens
Biosample type
312
tissue
92
cell line
88
in vitro differentiated cells
53
primary cell
1
stem cell
Organ
25
connective tissue
8
embryo
4
epithelium
1
liver
1
pancreas
Project
88
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
51
AMP-T2D consortium
37
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
6
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
88 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
38
adipocyte
25
neural progenitor cell
8
pancreatic endoderm
6
Hepatic endoderm
2
+ See 7 more…
See all biosamples
Download