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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
total RNA-seq
38
ChIP-seq
5
ATAC-seq
Assay category
84
Transcription
38
DNA binding
5
DNA accessibility
Target of assay
20
histone
20
histone modification
12
transcription factor
10
broad histone mark
10
narrow histone mark
6
control
5
RNA binding protein
Date released
127
May, 2021
26
February, 2021
25
August, 2017
23
February, 2018
17
August, 2021
14
February, 2023
9
December, 2017
8
March, 2020
6
October, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
89
bigWig
85
bam
79
tsv
6
tagAlign
bed narrowPeak
Organism
127
Homo sapiens
Biosample type
127
in vitro differentiated cells
79
primary cell
40
tissue
20
cell line
Organ
3
epithelium
2
embryo
1
connective tissue
1
heart
1
pancreas
Project
127
AMP
Genome assembly (visualization)
84
hg19
79
GRCh38
Lab
80
AMP-T2D consortium
47
Kyle Gaulton, UCSD
Audit category:
65
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
127 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
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