Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
16
pCHi-C
7
ChIP-seq
1
DNAme array
Assay category
55
Transcription
7
DNA binding
1
DNA methylation
Target of assay
4
histone
4
histone modification
3
control
2
broad histone mark
2
narrow histone mark
Date released
147
May, 2020
134
May, 2022
88
February, 2023
79
May, 2021
59
September, 2020
48
July, 2018
47
February, 2021
43
April, 2018
31
July, 2019
27
September, 2018
26
August, 2017
13
October, 2019
8
January, 2021
8
June, 2019
7
August, 2020
5
December, 2019
4
November, 2020
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
May, 2019
1
November, 2018
Available data
171
bigWig
149
bam
bed narrowPeak
84
tagAlign
52
tsv
2
bed bed3+
Organism
79
Homo sapiens
Biosample type
127
in vitro differentiated cells
79
primary cell
40
tissue
20
cell line
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
67
T1D
12
AMP
Genome assembly (visualization)
57
hg19
52
GRCh38
Lab
72
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
79 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
DNAme array
primary cell
monocyte
52
1
1
1
CD8-positive, alpha-beta T cell
2
1
3
naive thymus-derived CD4-positive, alpha-beta T cell
1
2
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 11 more…
See all biosamples
Download