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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
Assay category
108
DNA binding
Target of assay
187
control
108
histone
108
histone modification
58
narrow histone mark
50
broad histone mark
19
transcription factor
2
RNA binding protein
2
nucleotide modification
Date released
67
August, 2017
23
October, 2019
12
November, 2017
6
October, 2017
Available data
521
bigWig
bed narrowPeak
465
bam
312
bigBed narrowPeak
186
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
108
Homo sapiens
Biosample type
108
tissue
34
in vitro differentiated cells
21
primary cell
3
cell line
Organ
31
connective tissue
30
adipose tissue
20
brain
20
liver
11
pancreas
6
musculature of body
4
gonad
4
ovary
2
eye
1
limb
1
lymph node
Project
108
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
108
AMP-T2D consortium
Audit category:
4
missing controlled_by
files.file_type!
bed narrowPeak
month_released!
September, 2023
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
tissue
islet of Langerhans
32
subcutaneous abdominal adipose tissue
30
liver
20
brain
6
skeletal muscle tissue
6
cingulate gyrus
5
layer of hippocampus
3
substantia nigra
2
caudate nucleus
1
dorsal plus ventral thalamus
1
middle frontal area 46
1
planum polare
1
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