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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
22
total RNA-seq
14
ATAC-seq
4
pCHi-C
1
Hi-C
Assay category
50
DNA binding
22
Transcription
14
DNA accessibility
1
3D chromatin structure
Target of assay
27
control
23
histone
23
histone modification
23
narrow histone mark
Date released
537
February, 2021
218
August, 2017
166
May, 2020
165
August, 2021
120
July, 2018
91
October, 2019
70
July, 2019
47
September, 2023
40
May, 2021
38
March, 2020
32
February, 2023
29
October, 2018
28
May, 2022
25
February, 2020
24
November, 2017
22
May, 2019
20
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
12
December, 2017
11
October, 2017
9
November, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
186
bam
160
bigWig
bed narrowPeak
49
tagAlign
47
bigBed narrowPeak
8
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
91
Homo sapiens
Biosample type
91
tissue
15
cell line
13
primary cell
6
in vitro differentiated cells
Organ
21
eye
21
limb
15
nerve
11
brain
5
artery
5
blood vessel
5
vasculature
4
gonad
4
ovary
3
heart
3
pancreas
2
connective tissue
2
kidney
1
adipose tissue
1
liver
1
lymph node
1
pituitary gland
1
skin of body
Project
91
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
91
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
11
4
tibial artery
5
heart
2
1
kidney
2
adipose tissue
1
brain
1
central medial thalamic nucleus
1
cerebellum (Hemisphere)
1
dorsal plus ventral thalamus
1
gyrus rectus
1
liver
1
medial globus pallidus
1
occipital pole
1
planum polare
1
primary motor cortex
1
putamen
1
secondary auditory cortex
1
white matter
1
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