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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
187
control
108
histone
108
histone modification
58
narrow histone mark
50
broad histone mark
19
transcription factor
2
RNA binding protein
2
nucleotide modification
Date released
26
August, 2017
23
October, 2019
8
November, 2017
1
October, 2017
Available data
253
bigWig
bed narrowPeak
243
bam
110
tagAlign
108
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
58
Homo sapiens
Biosample type
58
tissue
15
in vitro differentiated cells
11
primary cell
1
cell line
Organ
11
brain
11
connective tissue
10
adipose tissue
8
liver
6
pancreas
4
gonad
4
ovary
2
eye
2
musculature of body
1
limb
1
lymph node
Project
58
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
58
AMP-T2D consortium
Audit category:
2
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
tissue
islet of Langerhans
27
subcutaneous abdominal adipose tissue
10
liver
8
cingulate gyrus
3
skeletal muscle tissue
2
substantia nigra
2
brain
1
caudate nucleus
1
dorsal plus ventral thalamus
1
layer of hippocampus
1
middle frontal area 46
1
planum polare
1
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