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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
4
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
4
DNA accessibility
Date released
142
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
bed narrowPeak
4
bed bed3
Organism
151
Homo sapiens
Biosample type
150
tissue
1
primary cell
Organ
714
pancreas
604
connective tissue
476
adipose tissue
354
epithelium
347
liver
197
heart
157
kidney
151
bone element
88
vasculature
86
blood vessel
72
brain
62
artery
34
musculature of body
23
embryo
20
lung
15
blood
15
bodily fluid
11
spleen
9
limb
8
skeleton
7
eye
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
150
AMP
1
T1D
Genome assembly (visualization)
62
hg19
58
GRCh38
Lab
150
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed narrowPeak
bedpe bed3+
month_released!
October, 2019
BIOSAMPLE
ASSAY
151 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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