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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
71
control
14
histone
14
histone modification
9
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
392
bam
334
bigWig
324
fastq
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
93
Homo sapiens
Biosample type
66
cell line
24
tissue
3
primary cell
Organ
66
liver
27
brain
2
epithelium
2
vasculature
1
blood vessel
Project
93
AMP
Genome assembly (visualization)
22
hg19
Lab
93
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
cell line
HepG2
66
tissue
cingulate gyrus
7
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
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primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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