Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
1
ChIP-seq
1
Hi-C
1
RRBS
Assay category
5
Transcription
1
3D chromatin structure
1
DNA binding
1
DNA methylation
Target of assay
1
control
Date released
5
December, 2019
2
July, 2019
1
August, 2021
Available data
12
bam
11
bigWig
6
bed bed3+
bed narrowPeak
5
tsv
4
tagAlign
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
8
Homo sapiens
Biosample type
228
tissue
76
cell line
8
primary cell
1
in vitro differentiated cells
Organ
148
epithelium
126
pancreas
21
connective tissue
16
vasculature
14
blood vessel
14
kidney
10
brain
9
vein
8
liver
7
heart
5
musculature of body
2
adipose tissue
2
artery
2
eye
1
pericardium
Project
8
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
8
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
8 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
Hi-C
RRBS
primary cell
hepatocyte
5
1
1
endothelial cell of hepatic sinusoid
1
Download