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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
145
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
23
control
Date released
647
February, 2021
269
August, 2017
269
May, 2020
168
July, 2018
145
May, 2021
125
August, 2021
125
October, 2019
101
July, 2019
93
November, 2017
60
March, 2020
49
April, 2018
40
February, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
15
April, 2019
15
November, 2018
10
December, 2019
10
October, 2017
9
January, 2019
8
January, 2018
8
June, 2019
6
September, 2017
5
December, 2018
4
August, 2018
4
November, 2020
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
238
bam
215
bigWig
144
tsv
50
tagAlign
bed narrowPeak
Organism
269
Homo sapiens
Biosample type
166
tissue
102
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
Genome assembly (visualization)
188
hg19
143
GRCh38
Lab
269
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
269 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
HepG2
1
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