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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
40
ChIP-seq
2
WGBS
Assay category
89
Transcription
40
DNA binding
2
DNA methylation
Target of assay
23
transcription factor
15
histone
15
histone modification
10
narrow histone mark
5
broad histone mark
2
control
1
RNA binding protein
Date released
545
February, 2021
188
May, 2020
173
May, 2021
164
July, 2018
131
August, 2017
74
July, 2019
49
April, 2018
26
September, 2018
20
November, 2019
19
October, 2019
15
August, 2021
15
February, 2018
13
March, 2020
12
May, 2023
7
August, 2020
7
November, 2018
5
December, 2017
5
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
2
October, 2017
2
October, 2018
2
September, 2017
1
March, 2023
Available data
249
bam
249
fastq
247
bigWig
bed narrowPeak
89
tsv
38
bigBed narrowPeak
33
bed bed3+
19
bed broadPeak
17
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
131
Homo sapiens
Biosample type
113
tissue
12
primary cell
6
in vitro differentiated cells
Organ
110
pancreas
20
connective tissue
14
adipose tissue
1
liver
Project
131
AMP
Genome assembly (visualization)
134
hg19
131
GRCh38
Lab
131
AMP-T2D consortium
Audit category:
38
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
131 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
tissue
islet of Langerhans
89
9
white adipose tissue
12
adipose tissue
2
liver
1
primary cell
pancreatic endocrine cell
12
in vitro differentiated cells
adipocyte
6
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