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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
1
DNase-seq
Assay category
114
DNA binding
89
Transcription
14
DNA methylation
1
DNA accessibility
Target of assay
67
histone
67
histone modification
41
broad histone mark
29
control
26
narrow histone mark
18
transcription factor
1
RNA binding protein
Date released
537
February, 2021
218
August, 2017
166
May, 2020
165
August, 2021
120
July, 2018
91
October, 2019
70
July, 2019
47
September, 2023
40
May, 2021
38
March, 2020
32
February, 2023
29
October, 2018
28
May, 2022
25
February, 2020
24
November, 2017
22
May, 2019
20
November, 2019
19
April, 2020
15
April, 2019
15
May, 2023
12
December, 2017
11
October, 2017
9
November, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
March, 2019
4
December, 2018
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
1
January, 2019
Available data
178
bigWig
175
fastq
170
bam
89
tsv
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
217
Homo sapiens
Biosample type
218
tissue
26
primary cell
25
in vitro differentiated cells
Organ
115
pancreas
54
adipose tissue
54
connective tissue
36
liver
13
musculature of body
Project
218
AMP
Genome assembly (visualization)
114
hg19
113
GRCh38
Lab
218
AMP-T2D consortium
Audit category:
21
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
218 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
24
89
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
skeletal muscle tissue
9
4
white adipose tissue
12
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