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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
69
ChIP-seq
2
WGBS
Assay category
89
Transcription
69
DNA binding
2
DNA methylation
Target of assay
31
control
23
transcription factor
15
histone
15
histone modification
10
narrow histone mark
5
broad histone mark
1
RNA binding protein
Date released
549
February, 2021
256
May, 2020
174
May, 2021
164
July, 2018
160
August, 2017
80
November, 2017
75
July, 2019
61
October, 2019
49
April, 2018
31
October, 2018
26
September, 2018
23
August, 2021
23
February, 2018
23
May, 2019
22
December, 2017
22
November, 2019
15
April, 2019
14
November, 2018
13
March, 2020
9
January, 2019
8
June, 2019
6
May, 2022
6
September, 2017
5
December, 2019
4
December, 2018
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2017
1
March, 2019
Available data
287
fastq
282
bam
272
bigWig
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
159
Homo sapiens
Biosample type
124
tissue
25
primary cell
11
in vitro differentiated cells
Organ
125
pancreas
26
connective tissue
15
adipose tissue
12
epithelium
8
liver
Project
160
AMP
Genome assembly (visualization)
131
GRCh38
130
hg19
Lab
160
AMP-T2D consortium
Audit category:
38
missing controlled_by
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
160 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
tissue
islet of Langerhans
89
10
white adipose tissue
12
liver
8
adipose tissue
1
2
pancreas
2
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
in vitro differentiated cells
adipocyte
11
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