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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
73
ChIP-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
89
Transcription
73
DNA binding
15
DNA methylation
1
DNA accessibility
Target of assay
histone
91
histone modification
53
broad histone mark
50
control
38
narrow histone mark
23
transcription factor
1
RNA binding protein
Date released
692
February, 2021
314
May, 2020
242
May, 2021
212
August, 2021
178
August, 2017
168
July, 2018
162
May, 2022
140
February, 2023
101
July, 2019
96
October, 2019
79
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
21
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
5
October, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
185
fastq
180
bam
150
bigWig
89
tsv
bed narrowPeak
21
bed bed3+
12
bigBed narrowPeak
11
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bed broadPeak
4
bigBed broadPeak
Organism
177
Homo sapiens
Biosample type
151
tissue
14
primary cell
13
in vitro differentiated cells
Organ
116
pancreas
37
connective tissue
24
adipose tissue
16
liver
12
epithelium
7
musculature of body
Project
178
AMP
Genome assembly (visualization)
119
hg19
116
GRCh38
Lab
178
AMP-T2D consortium
Audit category:
23
missing controlled_by
files.file_type!
bed narrowPeak
target.investigated_as!
histone
BIOSAMPLE
ASSAY
178 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
89
13
liver
11
3
1
white adipose tissue
12
subcutaneous abdominal adipose tissue
5
3
skeletal muscle tissue
3
4
+ See 3 more…
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
1
in vitro differentiated cells
adipocyte
13
See all biosamples
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