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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
43
single cell RNA-seq
6
total RNA-seq
Assay category
93
DNA binding
49
Transcription
Target of assay
71
control
14
histone
14
histone modification
9
narrow histone mark
8
transcription factor
5
broad histone mark
2
RNA binding protein
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
441
bam
383
bigWig
368
fastq
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
49
tsv
3
tar
Organism
142
Homo sapiens
Biosample type
66
cell line
46
primary cell
30
tissue
Organ
66
liver
39
pancreas
35
epithelium
27
brain
2
connective tissue
2
vasculature
1
blood vessel
Project
142
AMP
Genome assembly (visualization)
71
hg19
49
GRCh38
Lab
142
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
142 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
cell line
HepG2
66
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 8 more…
tissue
cingulate gyrus
7
islet of Langerhans
6
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
+ See 2 more…
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