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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
total RNA-seq
3
single cell RNA-seq
2
ChIP-seq
2
Hi-C
2
RNA microarray
Assay category
28
Transcription
2
3D chromatin structure
2
DNA binding
Target of assay
2
control
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
64
bam
bed narrowPeak
36
bigWig
29
tsv
2
bedpe bed3+
2
hic
Organism
34
Homo sapiens
Biosample type
23
tissue
5
primary cell
4
cell line
2
in vitro differentiated cells
Organ
24
pancreas
10
epithelium
5
liver
3
kidney
Project
34
AMP
Genome assembly (visualization)
27
hg19
25
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
4
audit script error
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
34 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
Hi-C
RNA microarray
tissue
islet of Langerhans
19
1
kidney
1
kidney interstitium
1
renal glomerulus
1
primary cell
hepatocyte
5
cell line
EndoC_BH1
1
2
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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