Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
152
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
152
DNA binding
89
Transcription
15
DNA methylation
1
DNA accessibility
Target of assay
91
histone
91
histone modification
53
broad histone mark
38
control
38
narrow histone mark
23
transcription factor
1
RNA binding protein
Date released
660
February, 2021
314
May, 2020
257
August, 2017
243
May, 2021
210
August, 2021
135
July, 2018
111
October, 2019
100
February, 2023
91
November, 2017
88
July, 2019
82
May, 2022
56
March, 2020
47
September, 2023
40
September, 2020
29
October, 2018
25
February, 2020
23
February, 2018
22
May, 2019
20
November, 2019
19
April, 2020
19
December, 2017
16
April, 2018
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
11
October, 2017
9
January, 2019
8
January, 2018
8
November, 2020
6
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
258
fastq
255
bigWig
253
bam
bed narrowPeak
89
tsv
85
tagAlign
41
bed broadPeak
39
bigBed narrowPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
256
Homo sapiens
Biosample type
218
tissue
25
in vitro differentiated cells
14
primary cell
Organ
139
pancreas
79
connective tissue
54
adipose tissue
36
liver
13
musculature of body
epithelium
Project
257
AMP
Genome assembly (visualization)
134
hg19
131
GRCh38
Lab
257
AMP-T2D consortium
Audit category:
38
missing controlled_by
files.file_type!
bed narrowPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
257 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans
24
89
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
skeletal muscle tissue
9
4
white adipose tissue
12
+ See 3 more…
in vitro differentiated cells
adipocyte
25
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
1
1
See all biosamples
Download