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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
23
control
Date released
660
February, 2021
314
May, 2020
257
August, 2017
243
May, 2021
210
August, 2021
135
July, 2018
111
October, 2019
100
February, 2023
91
November, 2017
88
July, 2019
82
May, 2022
56
March, 2020
47
September, 2023
40
September, 2020
29
October, 2018
25
February, 2020
23
February, 2018
22
May, 2019
20
November, 2019
19
April, 2020
19
December, 2017
16
April, 2018
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
11
October, 2017
9
January, 2019
8
January, 2018
8
November, 2020
6
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
283
bam
260
bigWig
189
tsv
50
tagAlign
bed narrowPeak
Organism
314
Homo sapiens
Biosample type
166
tissue
147
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
269
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
314 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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