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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
15
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
7
bam
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
24
Homo sapiens
Biosample type
22
tissue
2
primary cell
Organ
676
pancreas
596
connective tissue
478
adipose tissue
350
liver
333
epithelium
201
heart
171
kidney
143
bone element
103
vasculature
101
blood vessel
82
brain
67
artery
36
musculature of body
limb
24
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
1
hg19
Lab
24
AMP-T2D consortium
files.file_type!
bed narrowPeak
organ_slims!
limb
month_released!
February, 2023
BIOSAMPLE
ASSAY
24 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
1
primary cell
retinal pigment epithelial cell
1
1
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