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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
8
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
8
DNA binding
Target of assay
7
control
1
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
5
December, 2017
2
May, 2021
1
January, 2018
Available data
36
bam
29
bigWig
27
fastq
bed narrowPeak
14
tsv
3
bed bed3+
Organism
23
Homo sapiens
Biosample type
15
in vitro differentiated cells
8
cell line
Organ
727
pancreas
609
connective tissue
478
adipose tissue
370
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
1
hg18
Lab
23
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bed narrowPeak
organ_slims!
limb
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
23 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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