Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
RRBS
2
Hi-C
2
small RNA-seq
1
ATAC-seq
1
snATAC-seq
Assay category
6
Transcription
3
DNA methylation
2
3D chromatin structure
2
DNA accessibility
Date released
5
July, 2019
4
March, 2020
2
August, 2017
1
January, 2018
1
May, 2022
Available data
67
bigWig
bed narrowPeak
53
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
13
tagAlign
6
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
13
Homo sapiens
Biosample type
10
tissue
3
primary cell
Organ
515
connective tissue
446
pancreas
413
adipose tissue
188
liver
166
epithelium
75
heart
68
vasculature
66
blood vessel
62
bone element
54
artery
23
brain
17
kidney
15
embryo
13
musculature of body
4
limb
4
nerve
4
skeleton
4
vein
2
pericardium
1
blood
1
bodily fluid
1
eye
Project
13
AMP
Genome assembly (visualization)
13
hg19
7
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed narrowPeak
organ_slims!
spleen
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
RRBS
Hi-C
small RNA-seq
ATAC-seq
snATAC-seq
tissue
skeletal muscle tissue
1
2
1
1
1
psoas muscle
2
2
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
Download