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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
201
Transcription
69
DNA accessibility
53
DNA methylation
32
DNA binding
8
3D chromatin structure
Target of assay
27
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
12
August, 2017
8
October, 2019
3
December, 2017
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
1
May, 2021
Available data
129
bam
101
bigWig
bed narrowPeak
72
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
32
Homo sapiens
Biosample type
26
primary cell
4
in vitro differentiated cells
2
cell line
Organ
139
liver
95
connective tissue
78
pancreas
66
adipose tissue
48
brain
32
epithelium
27
vasculature
26
blood vessel
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
32
AMP
Genome assembly (visualization)
4
hg19
Lab
32
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
7
pancreatic alpha cell
6
pancreatic beta cell
6
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 4 more…
in vitro differentiated cells
Hepatic endoderm
2
hepatocyte
1
pancreatic PP cell
1
cell line
EndoC_BH1
2
See all biosamples
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