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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
single cell RNA-seq
28
total RNA-seq
2
ChIP-seq
Assay category
94
Transcription
2
DNA binding
Target of assay
2
control
Date released
33
July, 2018
29
April, 2018
26
September, 2018
3
August, 2018
2
November, 2017
2
October, 2018
1
June, 2018
Available data
285
bigWig
283
bam
173
fastq
147
tsv
bed narrowPeak
70
bigBed narrowPeak
16
bed broadPeak
16
bigBed broadPeak
15
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
5
tagAlign
3
cool
hdf5
1
tar
Organism
96
Homo sapiens
Biosample type
96
primary cell
Organ
218
pancreas
96
epithelium
26
liver
21
connective tissue
12
adipose tissue
5
embryo
3
brain
2
musculature of body
2
vasculature
1
blood vessel
Project
96
AMP
Genome assembly (visualization)
104
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
hdf5
BIOSAMPLE
ASSAY
96 results
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single cell RNA-seq
total RNA-seq
ChIP-seq
primary cell
pancreatic alpha cell
12
10
pancreatic beta cell
12
10
pancreatic acinar cell
9
4
pancreatic ductal cell
9
4
pancreatic delta cell
11
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