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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
12
DNA binding
Target of assay
6
control
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
Date released
9
August, 2017
2
June, 2019
1
May, 2019
Available data
bed narrowPeak
27
bigWig
17
bam
15
tagAlign
14
bigBed narrowPeak
13
bed broadPeak
Organism
12
Homo sapiens
Biosample type
10
tissue
2
primary cell
Organ
139
liver
95
connective tissue
78
pancreas
66
adipose tissue
48
brain
32
epithelium
27
vasculature
26
blood vessel
20
heart
18
limb
13
kidney
12
musculature of body
11
nerve
9
artery
8
embryo
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
Project
12
AMP
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
tissue
skeletal muscle tissue
9
muscle of leg
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
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