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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
17
ChIP-seq
2
WGBS
2
single cell RNA-seq
1
pCHi-C
Assay category
58
Transcription
17
DNA binding
2
DNA methylation
Target of assay
17
control
Date released
54
February, 2021
5
November, 2018
5
October, 2019
4
December, 2018
2
August, 2021
2
February, 2020
2
July, 2019
2
May, 2019
1
January, 2019
1
March, 2020
Available data
126
bam
101
bigWig
bed narrowPeak
59
tsv
38
bigBed narrowPeak
24
fastq
6
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
78
Homo sapiens
Biosample type
54
cell line
22
tissue
2
primary cell
Organ
732
pancreas
609
connective tissue
478
adipose tissue
373
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
78
AMP
Genome assembly (visualization)
56
GRCh38
54
hg19
Lab
78
AMP-T2D consortium
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
ChIP-seq
WGBS
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
2
tissue
spleen
8
2
1
tibial artery
1
5
coronary artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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