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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
17
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
narrow histone mark
Date released
20
October, 2019
5
July, 2019
3
February, 2020
1
May, 2019
Available data
100
bam
bed narrowPeak
77
bigWig
70
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
29
tissue
Organ
718
pancreas
594
connective tissue
468
adipose tissue
372
epithelium
341
liver
202
heart
171
kidney
151
bone element
102
vasculature
100
blood vessel
72
brain
67
artery
34
musculature of body
29
limb
26
eye
22
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
8
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
29
AMP-T2D consortium
files.file_type!
bed narrowPeak
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
muscle of leg
1
1
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