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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
Assay category
4
DNA binding
Target of assay
83
control
9
transcription factor
3
histone
3
histone modification
3
nucleotide modification
2
RNA binding protein
2
broad histone mark
1
narrow histone mark
1
recombinant protein
Date released
2
November, 2017
1
November, 2018
1
October, 2019
Available data
125
bigWig
124
bam
bed narrowPeak
101
bigBed narrowPeak
98
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
4
Homo sapiens
Biosample type
108
tissue
34
in vitro differentiated cells
21
primary cell
4
cell line
Organ
3
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
2
hg19
Lab
4
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
4 results
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ChIP-seq
cell line
HepG2
3
Panc1
1
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