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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
267
control
32
transcription factor
18
histone
18
histone modification
12
narrow histone mark
6
broad histone mark
4
RNA binding protein
1
recombinant protein
Date released
15
August, 2017
October, 2019
2
November, 2017
1
December, 2017
Available data
700
bigWig
bed narrowPeak
612
bam
333
bigBed narrowPeak
281
tagAlign
230
fastq
63
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
Organism
18
Homo sapiens
Biosample type
12
primary cell
3
tissue
2
cell line
1
in vitro differentiated cells
Organ
15
pancreas
2
liver
1
embryo
Project
18
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
month_released!
October, 2019
BIOSAMPLE
ASSAY
18 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
12
tissue
islet of Langerhans
3
cell line
HepG2
2
in vitro differentiated cells
pancreatic endoderm
1
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