Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
2
pCHi-C
Assay category
5
3D chromatin structure
Date released
4
March, 2020
2
October, 2019
1
November, 2019
Available data
212
bam
191
bigWig
150
tsv
84
txt
62
bed narrowPeak
24
bigBed narrowPeak
11
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
Organism
7
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
cell line
Organ
1
epithelium
1
pancreas
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
audit script error
files.file_type!
bedpe
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
7 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
cell line
EndoC_BH1
1
Download