Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
27
DNase-seq
12
total RNA-seq
6
WGBS
4
ATAC-seq
1
small RNA-seq
Assay category
107
DNA binding
31
DNA accessibility
13
Transcription
6
DNA methylation
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
47
April, 2019
40
May, 2024
27
June, 2019
17
July, 2019
15
May, 2019
7
October, 2019
2
March, 2020
2
May, 2021
Available data
173
bed narrowPeak
157
bigWig
132
bam
111
tsv
88
bigBed narrowPeak
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
157
Homo sapiens
Biosample type
157
tissue
56
cell line
10
primary cell
1
in vitro differentiated cells
Organ
481
connective tissue
423
adipose tissue
373
pancreas
265
liver
202
brain
157
heart
91
kidney
91
limb
70
blood vessel
70
vasculature
58
bone element
57
musculature of body
31
nerve
27
artery
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
157
AMP
Genome assembly (visualization)
156
GRCh38
109
hg19
Lab
117
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
files.file_type!
bedpe
BIOSAMPLE
ASSAY
157 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
WGBS
ATAC-seq
small RNA-seq
tissue
left cardiac atrium
40
1
heart left ventricle
29
3
3
2
2
heart
12
18
4
1
1
heart right ventricle
11
1
1
2
right atrium auricular region
7
2
2
1
coronary artery
3
2
1
right cardiac atrium
5
1
cardiac atrium
1
cardiac ventricle
1
See all biosamples
Download