Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
8
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
88
DNA binding
12
DNA accessibility
Target of assay
58
histone
58
histone modification
38
broad histone mark
28
transcription factor
20
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
284
bam
237
bigWig
219
bed narrowPeak
100
bigBed narrowPeak
49
tagAlign
35
fastq
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
100
Homo sapiens
Biosample type
50
tissue
35
cell line
13
primary cell
2
in vitro differentiated cells
Organ
46
limb
33
blood vessel
33
vasculature
27
blood
27
bodily fluid
26
nerve
20
artery
14
epithelium
13
vein
7
pancreas
3
connective tissue
3
spleen
1
adipose tissue
1
kidney
Project
100
AMP
Genome assembly (visualization)
100
hg19
96
GRCh38
Lab
100
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bedpe
BIOSAMPLE
ASSAY
100 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
spleen
3
adipose tissue
1
cell line
GM12878
27
Panc1
6
1
glomerular visceral epithelial cell
1
primary cell
endothelial cell of umbilical vein
10
2
1
in vitro differentiated cells
adipocyte
2
Download