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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
ChIP-seq
5
total RNA-seq
4
DNase-seq
3
ATAC-seq
Assay category
143
DNA binding
7
DNA accessibility
5
Transcription
Target of assay
120
histone
120
histone modification
87
narrow histone mark
33
broad histone mark
23
control
Date released
155
October, 2019
91
November, 2017
62
June, 2019
35
May, 2019
23
July, 2019
16
October, 2017
15
February, 2020
6
February, 2021
2
March, 2020
2
November, 2018
1
February, 2023
Available data
151
bam
128
bigWig
123
bed narrowPeak
46
bigBed narrowPeak
38
tagAlign
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
tagAlign bed3+
Organism
155
Homo sapiens
Biosample type
155
tissue
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
155
AMP
Genome assembly (visualization)
130
GRCh38
130
hg19
Lab
155
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bedpe
BIOSAMPLE
ASSAY
155 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
4
2
1
tibial artery
23
2
1
brain
5
1
superior frontal gyrus
4
central medial thalamic nucleus
3
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