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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
90
histone
90
histone modification
48
narrow histone mark
42
broad histone mark
9
transcription factor
8
RNA binding protein
2
control
1
chromatin remodeller
Date released
10
October, 2019
10
September, 2018
7
December, 2017
6
August, 2017
6
November, 2019
2
May, 2019
1
August, 2021
Available data
44
bam
42
bigWig
40
bed narrowPeak
23
fastq
14
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
bed bed3+
1
tagAlign
Organism
42
Homo sapiens
Biosample type
29
primary cell
7
in vitro differentiated cells
6
cell line
Organ
73
pancreas
60
brain
57
heart
43
blood vessel
43
vasculature
42
epithelium
34
limb
30
liver
16
connective tissue
16
musculature of body
16
nerve
15
kidney
14
artery
7
vein
4
embryo
4
spleen
Project
42
AMP
Genome assembly (visualization)
42
hg19
40
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
10
missing controlled_by
files.file_type!
bedpe
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
7
pancreatic ductal cell
6
pancreatic acinar cell
4
epithelial cell of proximal tubule
3
pancreatic alpha cell
3
+ See 3 more…
in vitro differentiated cells
hepatocyte
7
cell line
EndoC_BH1
6
See all biosamples
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