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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
Assay category
128
DNA binding
Target of assay
229
histone modification
228
histone
128
broad histone mark
99
narrow histone mark
79
control
62
transcription factor
19
RNA binding protein
3
chromatin remodeller
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
Available data
80
bigWig
75
bed narrowPeak
68
bam
60
fastq
45
tagAlign
37
bigBed narrowPeak
22
bed broadPeak
6
bed bed3+
6
bigBed broadPeak
Organism
124
Homo sapiens
Biosample type
92
tissue
20
in vitro differentiated cells
16
primary cell
Organ
51
pancreas
40
connective tissue
20
adipose tissue
19
liver
12
musculature of body
6
epithelium
Project
128
AMP
Genome assembly (visualization)
80
hg19
68
GRCh38
Lab
128
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent assembly
files.file_type!
bedpe
BIOSAMPLE
ASSAY
128 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
liver
19
islet of Langerhans
14
skeletal muscle tissue
12
body of pancreas
11
+ See 2 more…
in vitro differentiated cells
adipocyte
20
primary cell
skeletal muscle myoblast
6
pancreatic endocrine cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
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