Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
Assay category
110
DNA binding
DNA accessibility
Target of assay
78
histone
78
histone modification
40
narrow histone mark
37
broad histone mark
32
transcription factor
6
RNA binding protein
3
chromatin remodeller
Date released
42
August, 2017
34
December, 2017
16
February, 2018
13
August, 2021
5
May, 2021
Available data
273
bam
246
bigWig
140
fastq
131
tsv
110
bed narrowPeak
40
tagAlign
21
bed bed3+
14
bigBed narrowPeak
bedpe bed3+
4
hic
2
ibed
Organism
110
Homo sapiens
Biosample type
595
tissue
392
cell line
226
primary cell
110
in vitro differentiated cells
2
stem cell
Organ
42
connective tissue
18
epithelium
14
embryo
14
liver
2
pancreas
Project
110
AMP
Genome assembly (visualization)
110
GRCh38
109
hg19
Lab
110
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
17
inconsistent control read length
files.file_type!
bedpe bed3+
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
110 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
42
hepatocyte
14
neural progenitor cell
13
pancreatic endoderm
12
definitive endodermal cell
6
+ See 8 more…
See all biosamples
Download