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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
21
DNA binding
DNA accessibility
1
3D chromatin structure
Target of assay
19
histone
19
histone modification
10
narrow histone mark
9
broad histone mark
2
control
Date released
22
October, 2019
1
March, 2020
Available data
17
bam
12
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
2
hic
bedpe bed3+
1
tsv
Organism
23
Homo sapiens
Biosample type
18
primary cell
5
tissue
Organ
766
pancreas
760
liver
649
connective tissue
482
adipose tissue
396
epithelium
273
heart
249
brain
191
kidney
176
vasculature
172
blood vessel
147
bone element
92
artery
78
limb
60
blood
60
bodily fluid
59
musculature of body
40
nerve
37
embryo
29
eye
23
spleen
18
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
Genome assembly (visualization)
13
hg19
10
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bedpe bed3+
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
17
1
tissue
islet of Langerhans
4
ovary
1
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