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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
snATAC-seq
47
WGBS
Assay category
177
Transcription
49
DNA accessibility
47
DNA methylation
Date released
113
May, 2022
76
February, 2023
59
September, 2020
18
February, 2021
7
August, 2020
Available data
142
fastq
132
zippedFastqFolder
10
bigWig
6
tsv
bedpe bed3+
3
cool
3
hic
Organism
273
Homo sapiens
Biosample type
273
primary cell
Organ
149
epithelium
149
pancreas
Project
273
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
3892
AMP-T2D consortium
325
Kyle Gaulton, UCSD
273
Klaus Kaestner, Upenn
136
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
36
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
9
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
files.file_type!
bedpe bed3+
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
273 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell
42
29
31
Langerhans cell
85
pancreatic beta cell
11
16
16
exocrine cell
39
pancreatic acinar cell
4
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