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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
48
snATAC-seq
47
WGBS
45
single cell RNA-seq
39
ATAC-seq
Assay category
121
Transcription
87
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
76
February, 2023
September, 2020
45
February, 2021
Available data
134
zippedFastqFolder
121
fastq
6
tsv
bedpe bed3+
3
cool
3
hic
Organism
255
Homo sapiens
Biosample type
255
primary cell
Organ
123
epithelium
123
pancreas
Project
255
HPAP
Genome assembly (visualization)
GRCh38
Lab
1076
AMP-T2D consortium
255
Klaus Kaestner, Upenn
163
Kyle Gaulton, UCSD
67
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
35
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
files.file_type!
bedpe bed3+
assembly!
GRCh38
month_released!
September, 2020
BIOSAMPLE
ASSAY
255 results
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total RNA-seq
snATAC-seq
WGBS
single cell RNA-seq
ATAC-seq
primary cell
Langerhans cell
48
45
pancreatic alpha cell
27
31
22
exocrine cell
39
pancreatic beta cell
10
16
13
pancreatic acinar cell
4
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