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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
1
August, 2021
1
March, 2019
1
March, 2023
1
October, 2019
Available data
3180
bam
2937
bigWig
1714
bed narrowPeak
1450
tsv
1347
fastq
1018
bigBed narrowPeak
395
tagAlign
318
bed broadPeak
281
bigBed broadPeak
267
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
18
hic
bedpe bed3+
12
bed bed3
8
csv
6
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Organ
1
blood vessel
1
epithelium
1
kidney
1
pancreas
1
vasculature
1
vein
Project
3
AMP
1
ITG
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
1
audit script error
files.file_type!
bedpe bed3+
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
4 results
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Clear Filters
Hi-C
primary cell
chondrocytes
1
endothelial cell of umbilical vein
1
tissue
islet of Langerhans
1
kidney
1
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