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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
Assay category
516
Transcription
482
DNA accessibility
481
DNA binding
80
DNA methylation
9
3D chromatin structure
1
DNA sequencing
Date released
4
July, 2019
1
August, 2021
1
December, 2018
1
March, 2019
1
March, 2023
1
October, 2019
Available data
23
hic
bedpe bed3+
5
bed bed3+
bigWig
5
hdf5
3
cool
1
bedpe
1
fastq
Organism
9
Homo sapiens
Biosample type
6
tissue
2
primary cell
1
cell line
Organ
4
limb
4
musculature of body
1
blood vessel
1
epithelium
1
kidney
1
liver
1
pancreas
1
vasculature
1
vein
Project
8
AMP
1
ITG
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
1
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files.file_type!
bedpe bed3+
bigWig
BIOSAMPLE
ASSAY
9 results
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Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
1
kidney
1
primary cell
chondrocytes
1
endothelial cell of umbilical vein
1
cell line
HepG2
1
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