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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
snATAC-seq
2
RNA microarray
2
single cell RNA-seq
1
Hi-C
Assay category
28
DNA accessibility
2
Transcription
1
3D chromatin structure
Date released
27
February, 2021
4
December, 2019
1
August, 2022
1
October, 2019
Available data
27
fastq
9
tsv
txt
5
csv
4
hic
bedpe bed3+
3
cool
1
bed bed3+
Organism
33
Homo sapiens
Biosample type
28
primary cell
3
tissue
2
in vitro differentiated cells
Organ
2
epithelium
2
kidney
1
blood vessel
1
pancreas
1
vasculature
1
vein
Project
27
HPAP
6
AMP
Genome assembly (visualization)
1
hg19
Lab
27
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
261
inconsistent ontology term
33
audit script error
28
inconsistent control
1
inconsistent replicate
files.file_type!
bedpe bed3+
txt
BIOSAMPLE
ASSAY
33 results
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snATAC-seq
RNA microarray
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
27
endothelial cell of umbilical vein
1
tissue
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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