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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
67
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
61
transcription factor
21
RNA binding protein
15
recombinant protein
6
control
5
chromatin remodeller
3
other context
3
other post-translational modification
Date released
572
February, 2021
382
November, 2017
283
May, 2020
277
May, 2021
250
October, 2019
243
August, 2017
218
June, 2019
164
July, 2018
120
May, 2019
93
December, 2017
84
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
59
November, 2019
49
April, 2018
49
August, 2021
40
September, 2018
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
12
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
85
fastq
84
bam
78
bigWig
71
bed narrowPeak
71
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
84
Homo sapiens
Biosample type
58
cell line
26
tissue
Organ
50
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
84
AMP
Genome assembly (visualization)
77
GRCh38
69
hg19
Lab
84
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
2
inconsistent control run_type
files.file_type!
bedpe bed3+
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
42
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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