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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
326
transcription factor
101
control
82
recombinant protein
80
histone modification
79
histone
57
RNA binding protein
50
narrow histone mark
29
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
10
December, 2017
8
November, 2017
7
August, 2017
3
October, 2019
1
August, 2021
Available data
30
bigWig
29
bam
29
bed narrowPeak
25
fastq
21
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
29
Homo sapiens
Biosample type
13
tissue
8
cell line
7
in vitro differentiated cells
1
primary cell
Organ
70
pancreas
61
brain
45
blood vessel
45
vasculature
44
epithelium
37
heart
34
limb
29
liver
16
connective tissue
16
nerve
15
kidney
14
artery
9
vein
8
musculature of body
4
embryo
4
spleen
Project
29
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
6
inconsistent control read length
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
tissue
liver
10
right lobe of liver
3
cell line
HepG2
8
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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