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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
80
DNA binding
Target of assay
326
transcription factor
101
control
82
recombinant protein
80
histone modification
79
histone
57
RNA binding protein
50
narrow histone mark
29
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
17
December, 2017
15
November, 2017
13
August, 2017
5
October, 2019
3
August, 2021
Available data
83
bigWig
81
bed narrowPeak
80
bam
58
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
80
Homo sapiens
Biosample type
50
tissue
15
cell line
12
in vitro differentiated cells
3
primary cell
Organ
166
brain
137
pancreas
93
epithelium
80
liver
71
vasculature
70
blood vessel
61
heart
48
limb
34
connective tissue
30
kidney
24
nerve
20
artery
15
vein
14
musculature of body
12
embryo
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
80
hg19
70
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
tissue
liver
45
right lobe of liver
5
cell line
HepG2
15
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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