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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
3
MeRIP-seq
Assay category
10
DNA binding
Target of assay
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
14
transcription factor
13
control
7
recombinant protein
4
RNA binding protein
3
nucleotide modification
Date released
4
June, 2019
3
November, 2020
3
October, 2019
December, 2017
2
November, 2019
1
May, 2019
Available data
10
bam
Organism
13
Homo sapiens
Biosample type
8
cell line
5
primary cell
Organ
7
epithelium
5
kidney
5
pancreas
2
connective tissue
1
heart
1
musculature of body
Project
13
AMP
Lab
10
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
13
inconsistent ontology term
files.file_type!
bedpe bed3+
month_released!
December, 2017
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
2
3
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
mesenchymal stem cell
1
skeletal muscle satellite cell
1
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