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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
129
ChIP-seq
103
ATAC-seq
70
single cell RNA-seq
47
WGBS
19
DNase-seq
6
MeRIP-seq
6
RRBS
3
Hi-C
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
FAIRE-seq
1
RNA microarray
Assay category
3
3D chromatin structure
Date released
2
July, 2019
1
October, 2019
Available data
6
hic
bedpe bed3+
3
cool
2
bed bed3+
2
bigWig
2
hdf5
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
4
limb
4
musculature of body
3
blood vessel
3
brain
3
epithelium
3
vasculature
2
liver
2
pancreas
1
connective tissue
1
kidney
1
vein
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bedpe bed3+
organ_slims!
nerve
BIOSAMPLE
ASSAY
3 results
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Hi-C
primary cell
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
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